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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_030843.3 → NP_110470.1 syntaxin-binding protein 5 isoform m
See identical proteins and their annotated locations for NP_110470.1
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000001
- UniProtKB/TrEMBL
- A0A8I6GF49, A6JP29
- Conserved Domains (5) summary
-
- COG2319
Location:47 → 275
- WD40; WD40 repeat [General function prediction only]
- cd15893
Location:1049 → 1109
- R-SNARE_STXBP5; SNARE domain of STXBP5
- pfam08366
Location:277 → 384
- LLGL; LLGL2
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_178345.2 → NP_848035.1 syntaxin-binding protein 5 isoform b
See identical proteins and their annotated locations for NP_848035.1
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000001
- UniProtKB/Swiss-Prot
- Q9WU70, Q9WU71, Q9Z152
- UniProtKB/TrEMBL
- A0A8I6APW1, A6JP31
- Related
- ENSRNOP00000049322.4, ENSRNOT00000049699.8
- Conserved Domains (5) summary
-
- COG2319
Location:47 → 275
- WD40; WD40 repeat [General function prediction only]
- cd15893
Location:1085 → 1145
- R-SNARE_STXBP5; SNARE domain of STXBP5
- pfam08366
Location:277 → 384
- LLGL; LLGL2
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_178346.2 → NP_848036.1 syntaxin-binding protein 5 isoform s
See identical proteins and their annotated locations for NP_848036.1
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000001
- UniProtKB/TrEMBL
- A0A8I6GF49, A6JP28
- Conserved Domains (5) summary
-
- COG2319
Location:47 → 275
- WD40; WD40 repeat [General function prediction only]
- cd15893
Location:1032 → 1092
- R-SNARE_STXBP5; SNARE domain of STXBP5
- pfam08366
Location:277 → 384
- LLGL; LLGL2
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086019.1 Reference GRCr8
- Range
-
6002738..6155528 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039091853.2 → XP_038947781.1 syntaxin-binding protein 5 isoform X1
- UniProtKB/TrEMBL
- A0A8L2QJB5, A0A8L2QLQ5, A6JP30
- Related
- ENSRNOP00000044738.4, ENSRNOT00000040559.7
- Conserved Domains (5) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- cd15893
Location:1069 → 1129
- R-SNARE_STXBP5; SNARE domain of STXBP5
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_063275001.1 → XP_063131071.1 syntaxin-binding protein 5 isoform X11
- UniProtKB/TrEMBL
-
A0A8I6ADC8
-
XM_063274990.1 → XP_063131060.1 syntaxin-binding protein 5 isoform X10
- UniProtKB/TrEMBL
- A0A8I6ADC8, A0A8I6AIJ8
- Related
- ENSRNOP00000092947.1, ENSRNOT00000115103.2
-
XM_063274968.1 → XP_063131038.1 syntaxin-binding protein 5 isoform X2
- UniProtKB/TrEMBL
-
A0A8I6APW1
- Related
- ENSRNOP00000099537.1, ENSRNOT00000133785.1
-
XM_063274970.1 → XP_063131040.1 syntaxin-binding protein 5 isoform X3
-
XM_039091879.2 → XP_038947807.1 syntaxin-binding protein 5 isoform X8
- Conserved Domains (4) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_039091859.2 → XP_038947787.1 syntaxin-binding protein 5 isoform X4
- Conserved Domains (4) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_039091874.2 → XP_038947802.1 syntaxin-binding protein 5 isoform X7
- Conserved Domains (4) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_039091862.2 → XP_038947790.1 syntaxin-binding protein 5 isoform X5
- Conserved Domains (4) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_039091865.2 → XP_038947793.1 syntaxin-binding protein 5 isoform X6
- Conserved Domains (4) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_039091888.2 → XP_038947816.1 syntaxin-binding protein 5 isoform X9
- Conserved Domains (4) summary
-
- COG2319
Location:237 → 539
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:62 → 95
- 7WD40; WD40 repeat [structural motif]
- pfam08366
Location:276 → 384
- LLGL; LLGL2
- cl29593
Location:62 → 280
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
RNA
-
XR_005492948.2 RNA Sequence
-
XR_005492935.2 RNA Sequence