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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164190.2 → NP_001157662.1 myotubularin isoform 1
See identical proteins and their annotated locations for NP_001157662.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Variants 1-3 all encode the same isoform (1).
- Source sequence(s)
-
AL731843, AL772294
- Consensus CDS
-
CCDS30177.1
- UniProtKB/Swiss-Prot
- Q5BKQ5, Q9Z2C5
- UniProtKB/TrEMBL
-
Q9D4L1
- Related
- ENSMUSP00000125798.2, ENSMUST00000171933.8
- Conserved Domains (2) summary
-
- pfam06602
Location:150 → 483
- Myotub-related; Myotubularin-like phosphatase domain
- cl17171
Location:44 → 143
- PH-like; Pleckstrin homology-like domain
-
NM_001164191.2 → NP_001157663.1 myotubularin isoform 1
See identical proteins and their annotated locations for NP_001157663.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-3 all encode the same isoform (1).
- Source sequence(s)
-
AL731843, AL772294
- Consensus CDS
-
CCDS30177.1
- UniProtKB/Swiss-Prot
- Q5BKQ5, Q9Z2C5
- UniProtKB/TrEMBL
-
Q9D4L1
- Related
- ENSMUSP00000057182.6, ENSMUST00000061970.12
- Conserved Domains (2) summary
-
- pfam06602
Location:150 → 483
- Myotub-related; Myotubularin-like phosphatase domain
- cl17171
Location:44 → 143
- PH-like; Pleckstrin homology-like domain
-
NM_001164192.2 → NP_001157664.1 myotubularin isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AL731843, AL772294
- Consensus CDS
-
CCDS53090.1
- UniProtKB/TrEMBL
- B1AW21, Q9D4L1
- Related
- ENSMUSP00000025391.5, ENSMUST00000025391.11
- Conserved Domains (2) summary
-
- pfam06602
Location:150 → 452
- Myotub-related; Myotubularin-like phosphatase domain
- cl17171
Location:44 → 143
- PH-like; Pleckstrin homology-like domain
-
NM_001164193.2 → NP_001157665.1 myotubularin isoform 3
See identical proteins and their annotated locations for NP_001157665.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and contains an alternate exon in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 3, which has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AL731843
- Consensus CDS
-
CCDS53089.1
- UniProtKB/TrEMBL
-
Q3UDN6
- Related
- ENSMUSP00000099040.4, ENSMUST00000101501.10
- Conserved Domains (1) summary
-
- cl17171
Location:44 → 143
- PH-like; Pleckstrin homology-like domain
-
NM_001425918.1 → NP_001412847.1 myotubularin isoform 5
Status: VALIDATED
- Source sequence(s)
-
AL731843
-
NM_001425919.1 → NP_001412848.1 myotubularin isoform 6
Status: VALIDATED
- Source sequence(s)
-
AL731843, AL772294
- UniProtKB/TrEMBL
-
Q9D4L1
-
NM_001425920.1 → NP_001412849.1 myotubularin isoform 7
Status: VALIDATED
- Source sequence(s)
-
AL731843, AL772294
- UniProtKB/TrEMBL
-
Q3TLK7
-
NM_001425921.1 → NP_001412850.1 myotubularin isoform 8
Status: VALIDATED
- Source sequence(s)
-
AL731843, AL772294
- UniProtKB/TrEMBL
-
Q9D4L1
-
NM_019926.5 → NP_064310.2 myotubularin isoform 1
See identical proteins and their annotated locations for NP_064310.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-3 all encode the same isoform (1).
- Source sequence(s)
-
AL731843, AL772294
- Consensus CDS
-
CCDS30177.1
- UniProtKB/Swiss-Prot
- Q5BKQ5, Q9Z2C5
- UniProtKB/TrEMBL
-
Q9D4L1
- Related
- ENSMUSP00000110264.2, ENSMUST00000114617.2
- Conserved Domains (2) summary
-
- pfam06602
Location:150 → 483
- Myotub-related; Myotubularin-like phosphatase domain
- cl17171
Location:44 → 143
- PH-like; Pleckstrin homology-like domain
RNA
-
NR_189633.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL731843, AL772294
-
NR_189634.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL731843, AL772294
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000086.8 Reference GRCm39 C57BL/6J
- Range
-
70254373..70359019
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006527890.2 → XP_006527953.1 myotubularin isoform X2
- UniProtKB/TrEMBL
-
Q9D4L1
- Conserved Domains (2) summary
-
- pfam06602
Location:151 → 488
- Myotub-related; Myotubularin-like phosphatase domain
- cl17171
Location:44 → 143
- PH-like; Pleckstrin homology-like domain
-
XM_030251246.1 → XP_030107106.1 myotubularin isoform X4
- UniProtKB/TrEMBL
-
Q5DTJ6
- Conserved Domains (1) summary
-
- pfam06602
Location:41 → 352
- Myotub-related; Myotubularin-like phosphatase domain