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    T21B6.3 Apple domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181284, updated on 18-Sep-2024

    Summary

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    Official Symbol
    T21B6.3
    Official Full Name
    Apple domain-containing protein
    Primary source
    WormBase:WBGene00011880
    Locus tag
    CELE_T21B6.3
    See related
    AllianceGenome:WB:WBGene00011880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See T21B6.3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Sequence:
    Chromosome: X; NC_003284.9 (10945160..10948952, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Lysosomal acid phosphatase Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene Na(+)/H(+) exchanger protein 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Systematic interactome mapping and genetic perturbation analysis of a C. elegans TGF-beta signaling network. Tewari M, et al. Mol Cell, 2004 Feb 27. PMID 14992718
    2. The Caenorhabditis elegans RDE-10/RDE-11 complex regulates RNAi by promoting secondary siRNA amplification. Zhang C, et al. Curr Biol, 2012 May 22. PMID 22542102, Free PMC Article
    3. Protein interaction mapping in C. elegans using proteins involved in vulval development. Walhout AJ, et al. Science, 2000 Jan 7. PMID 10615043
    4. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    5. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Apple domain-containing protein
    NP_509829.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10945160..10948952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077428.6 → NP_509829.2  Apple domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509829.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22631
      Conserved Domains (2) summary
      smart00209
      Location:505 → 552
      TSP1; Thrombospondin type 1 repeats
      smart00473
      Location:35 → 108
      PAN_AP; divergent subfamily of APPLE domains
    Nucleotide Protein
    Heading Accession and Version

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