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    tbcd-1 Tubulin-specific chaperone D [ Caenorhabditis elegans ]

    Gene ID: 172622, updated on 9-Dec-2024

    Summary

    Official Symbol
    tbcd-1
    Official Full Name
    Tubulin-specific chaperone D
    Primary source
    WormBase:WBGene00008887
    Locus tag
    CELE_F16D3.4
    See related
    AllianceGenome:WB:WBGene00008887
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable GTPase activator activity and beta-tubulin binding activity. Involved in microtubule cytoskeleton organization. Predicted to be located in microtubule. Predicted to be active in lateral plasma membrane. Is expressed in intestine; nervous system; and pharynx. Human ortholog(s) of this gene implicated in early onset progressive encephalopathy with brain atrophy and thin corpus callosum. Orthologous to human TBCD (tubulin folding cofactor D). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See tbcd-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    11
    Sequence:
    Chromosome: I; NC_003279.8 (8363954..8369562, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene SAC domain-containing protein Neighboring gene putative cytochrome P450 CYP36A1 Neighboring gene Tubulin alpha chain Neighboring gene Tudor domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene PQ-loop repeat-containing protein 1 Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables GTPase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables beta-tubulin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables beta-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in adherens junction assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in bicellular tight junction assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in microtubule cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in microtubule cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in post-chaperonin tubulin folding pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in tubulin complex assembly IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in lateral plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Tubulin-specific chaperone D
    NP_001369974.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      8363954..8369562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383466.2NP_001369974.1  Tubulin-specific chaperone D [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q19493
      Conserved Domains (3) summary
      sd00044
      Location:373401
      HEAT; HEAT repeat [structural motif]
      pfam12612
      Location:8971072
      TFCD_C; Tubulin folding cofactor D C terminal
      cl19887
      Location:359928
      TFCD_C; Tubulin folding cofactor D C terminal