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    • Showing Current items.

    srd-49 G-protein coupled receptors family 1 profile domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187569, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srd-49
    Official Full Name
    G-protein coupled receptors family 1 profile domain-containing protein
    Primary source
    WormBase:WBGene00005127
    Locus tag
    CELE_R04B5.8
    See related
    AllianceGenome:WB:WBGene00005127
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srd-49 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (10094674..10096402)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene BHLH domain-containing protein Neighboring gene Transposase Neighboring gene Putative UDP-glucuronosyltransferase ugt-47 Neighboring gene pseudo Neighboring gene Purple acid phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
    2. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    G-protein coupled receptors family 1 profile domain-containing protein
    NP_505594.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      10094674..10096402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073193.5 → NP_505594.1  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_505594.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21705
      Conserved Domains (1) summary
      pfam10317
      Location:11 → 300
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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