U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ham-1 Stork-head box protein ham-1 [ Caenorhabditis elegans ]

    Gene ID: 178205, updated on 2-Nov-2024

    Summary

    Official Symbol
    ham-1
    Official Full Name
    Stork-head box protein ham-1
    Primary source
    WormBase:WBGene00001820
    Locus tag
    CELE_F53B2.6
    See related
    AllianceGenome:WB:WBGene00001820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in several processes, including asymmetric protein localization involved in cell fate determination; generation of neurons; and protein localization to actomyosin contractile ring. Located in cell cortex and nucleus. Is expressed in several structures, including anal region; digestive tract; gonad; head; and midbody. Human ortholog(s) of this gene implicated in pre-eclampsia. Orthologous to several human genes including STOX1 (storkhead box 1). [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ham-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (12542183..12545737)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Kinase Neighboring gene ncRNA Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell cortex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell cortex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Stork-head box protein ham-1
    NP_502401.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12542183..12545737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070000.8NP_502401.1  Stork-head box protein ham-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502401.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      G5EEC5
      Conserved Domains (1) summary
      pfam10264
      Location:93169
      Stork_head; Winged helix Storkhead-box1 domain