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    C50F2.2 CCHC-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171972, updated on 18-Sep-2024

    Summary

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    Official Symbol
    C50F2.2
    Official Full Name
    CCHC-type domain-containing protein
    Primary source
    WormBase:WBGene00016836
    Locus tag
    CELE_C50F2.2
    See related
    AllianceGenome:WB:WBGene00016836
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See C50F2.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    6
    Sequence:
    Chromosome: I; NC_003279.8 (3881816..3888315)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like modifier-activating enzyme 5 Neighboring gene Protein SYS1 homolog Neighboring gene Pre-mRNA-splicing factor SYF1 Neighboring gene Antibacterial factor-related peptide 2 Neighboring gene Antibacterial factor-related peptide 1 Neighboring gene DUF281 domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Tyrosine-protein phosphatase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CCHC-type domain-containing protein
    NP_491251.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      3881816..3888315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058850.6 → NP_491251.1  CCHC-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491251.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      P91176
      Conserved Domains (1) summary
      PTZ00449
      Location:201 → 521
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    Nucleotide Protein
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