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    F22B5.10 Calcium load-activated calcium channel homolog [ Caenorhabditis elegans ]

    Gene ID: 174352, updated on 9-Dec-2024

    Summary

    Official Symbol
    F22B5.10
    Official Full Name
    Calcium load-activated calcium channel homolog
    Primary source
    WormBase:WBGene00009045
    Locus tag
    CELE_F22B5.10
    See related
    AllianceGenome:WB:WBGene00009045
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium channel activity. Involved in calcium ion transmembrane transport and endoplasmic reticulum calcium ion homeostasis. Located in striated muscle dense body. Human ortholog(s) of this gene implicated in craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 1. Orthologous to human TMCO1 (transmembrane and coiled-coil domains 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See F22B5.10 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003280.10 (8467174..8468010)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Zygote defective protein 9 Neighboring gene Phenylalanine--tRNA ligase beta subunit Neighboring gene T-complex protein 11-like protein 1 Neighboring gene ShKT domain-containing protein Neighboring gene pseudo

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables calcium channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in striated muscle dense body HDA PubMed 

    General protein information

    Preferred Names
    Calcium load-activated calcium channel homolog
    NP_495786.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8467174..8468010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063385.8NP_495786.1  Calcium load-activated calcium channel homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495786.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q19714
      Conserved Domains (1) summary
      pfam01956
      Location:6162
      DUF106; Integral membrane protein DUF106