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    valv-1 LIM zinc-binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182010, updated on 9-Dec-2024

    Summary

    Official Symbol
    valv-1
    Official Full Name
    LIM zinc-binding domain-containing protein
    Primary source
    WormBase:WBGene00015216
    Locus tag
    CELE_B0496.7
    See related
    AllianceGenome:WB:WBGene00015216
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. Involved in digestive system process and egg-laying behavior. Predicted to be active in cytoplasm. Orthologous to human CRIP1 (cysteine rich protein 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See valv-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    3
    Sequence:
    Chromosome: IV; NC_003282.8 (7444639..7445336, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein kinase domain-containing protein;non-specific serine/threonine protein kinase Neighboring gene ncRNA Neighboring gene Secreted protein Neighboring gene ncRNA Neighboring gene BTB domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in digestive system process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in egg-laying behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in innate immune response HEP PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    LIM zinc-binding domain-containing protein
    NP_501187.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7444639..7445336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068786.7NP_501187.1  LIM zinc-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501187.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17522
      Conserved Domains (1) summary
      cd09401
      Location:458
      LIM_TLP_like; The LIM domains of thymus LIM protein (TLP)