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    • Showing Current items.

    C39F7.5 BACK domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178621, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C39F7.5
    Official Full Name
    BACK domain-containing protein
    Primary source
    WormBase:WBGene00016540
    Locus tag
    CELE_C39F7.5
    See related
    AllianceGenome:WB:WBGene00016540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in morphogenesis of a branching epithelium. Orthologous to human BTBD7 (BTB domain containing 7). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C39F7.5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (1264773..1270107)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene RAB family Neighboring gene ncRNA Neighboring gene DNA-directed RNA polymerase III subunit RPC4 Neighboring gene ANK_REP_REGION domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in morphogenesis of a branching epithelium IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BACK domain-containing protein
    NP_503398.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1264773..1270107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070997.7 → NP_503398.1  BACK domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503398.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9UAQ7
      Conserved Domains (2) summary
      cd18284
      Location:212 → 353
      BTB2_POZ_BTBD7; second BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 7 (BTBD7)
      cd18489
      Location:358 → 454
      BACK_BTBD7; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 7 (BTBD7)
    Nucleotide Protein
    Heading Accession and Version

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