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    C39F7.1 HET domain-containing protein;Transmembrane protein [ Caenorhabditis elegans ]

    Gene ID: 183348, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C39F7.1
    Official Full Name
    HET domain-containing protein;Transmembrane protein
    Primary source
    WormBase:WBGene00016538
    Locus tag
    CELE_C39F7.1
    See related
    AllianceGenome:WB:WBGene00016538
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in nervous system and reproductive system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C39F7.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (1260342..1262618)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TRIM9 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RAB family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    HET domain-containing protein;Transmembrane protein
    NP_001300058.1
    • Confirmed by transcript evidence
    NP_001300059.1
    • Confirmed by transcript evidence
    NP_001300060.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      1260342..1262618
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001313130.4 → NP_001300059.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AXN1

    2. NM_001313129.3 → NP_001300058.1  Transmembrane protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AVD6

    3. NM_001313131.3 → NP_001300060.1  HET domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ASC1
    Nucleotide Protein
    Heading Accession and Version

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