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    B0432.8 Deoxyribonuclease TATDN3 [ Caenorhabditis elegans ]

    Gene ID: 181990, updated on 9-Dec-2024

    Summary

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    Official Symbol
    B0432.8
    Official Full Name
    Deoxyribonuclease TATDN3
    Primary source
    WormBase:WBGene00015189
    Locus tag
    CELE_B0432.8
    See related
    AllianceGenome:WB:WBGene00015189
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable hydrolase activity, acting on ester bonds and metal ion binding activity. Orthologous to human TATDN3 (TatD DNase domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See B0432.8 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (276212..278736, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Biopterin-dependent aromatic amino acid hydroxylase family profile domain-containing protein;Tyrosine 3-monooxygenase Neighboring gene Neuropeptide-Like Protein;Transposase Neighboring gene CIP2A N-terminal domain-containing protein Neighboring gene E3 ubiquitin-protein ligase trul-1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Metallo-beta-lactamase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables hydrolase activity, acting on ester bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Deoxyribonuclease TATDN3
    NP_001370338.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      276212..278736 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383775.2 → NP_001370338.1  Deoxyribonuclease TATDN3 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      P90989
      Conserved Domains (1) summary
      pfam01026
      Location:2 → 258
      TatD_DNase; TatD related DNase
    Nucleotide Protein
    Heading Accession and Version

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