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    pstk-1 Phosphoryl Seryl-TRNA (Ser/Sec) Kinase [ Caenorhabditis elegans ]

    Gene ID: 190070, updated on 9-Dec-2024

    Summary

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    Official Symbol
    pstk-1
    Official Full Name
    Phosphoryl Seryl-TRNA (Ser/Sec) Kinase
    Primary source
    WormBase:WBGene00013041
    Locus tag
    CELE_Y49E10.22
    See related
    AllianceGenome:WB:WBGene00013041
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable kinase activity and tRNA binding activity. Orthologous to human PSTK (phosphoseryl-tRNA kinase). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See pstk-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (12466610..12468293)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Sensory neuron membrane protein 2 Neighboring gene Conserved oligomeric Golgi complex subunit 7;RAD50-interacting protein 1 Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CARD domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables tRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Phosphoryl Seryl-TRNA (Ser/Sec) Kinase
    NP_499627.1
    • Product from WormBase gene class pstk;
      Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      12466610..12468293
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067226.2 → NP_499627.1  Phosphoryl Seryl-TRNA (Ser/Sec) Kinase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499627.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XTU1
      Conserved Domains (2) summary
      pfam13671
      Location:3 → 135
      AAA_33; AAA domain
      cl17190
      Location:3 → 228
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
    Nucleotide Protein
    Heading Accession and Version

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