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    • Showing Current items.

    T10B11.5 DUF1273 family protein [ Caenorhabditis elegans ]

    Gene ID: 188370, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T10B11.5
    Official Full Name
    DUF1273 family protein
    Primary source
    WormBase:WBGene00020401
    Locus tag
    CELE_T10B11.5
    See related
    AllianceGenome:WB:WBGene00020401
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Human ortholog(s) of this gene implicated in craniotubular dysplasia Ikegawa type. Orthologous to human TMEM53 (transmembrane protein 53). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T10B11.5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (6940215..6943077, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Ceramide kinase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ubiquitin-like domain-containing protein Neighboring gene Transmembrane protein 53 Neighboring gene Protein hrde-4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    DUF1273 family protein
    NP_491979.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      6940215..6943077 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059578.3 → NP_491979.1  DUF1273 family protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491979.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZH9
      Conserved Domains (1) summary
      pfam05705
      Location:15 → 266
      DUF829; Eukaryotic protein of unknown function (DUF829)
    Nucleotide Protein
    Heading Accession and Version

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