U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    R02F11.3 Cation efflux protein cytoplasmic domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178869, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    R02F11.3
    Official Full Name
    Cation efflux protein cytoplasmic domain-containing protein
    Primary source
    WormBase:WBGene00019841
    Locus tag
    CELE_R02F11.3
    See related
    AllianceGenome:WB:WBGene00019841
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in manganese ion transmembrane transport. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See R02F11.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (4802633..4805947, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CX domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CC domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Adenylosuccinate synthetase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables monoatomic cation transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in manganese ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in monoatomic cation transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in monoatomic cation transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Cation efflux protein cytoplasmic domain-containing protein
    NP_001024065.1
    • Confirmed by transcript evidence
    NP_001024066.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      4802633..4805947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001028895.5 → NP_001024066.1  Cation efflux protein cytoplasmic domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024066.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5ZR77
      Conserved Domains (1) summary
      cl30791
      Location:191 → 475
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]

    2. NM_001028894.6 → NP_001024065.1  Cation efflux protein cytoplasmic domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024065.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ89
      Conserved Domains (1) summary
      cl30791
      Location:169 → 453
      FieF; Divalent metal cation (Fe/Co/Zn/Cd) transporter [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools