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    trpp-8 Trafficking protein particle complex subunit 8 [ Caenorhabditis elegans ]

    Gene ID: 172217, updated on 9-Dec-2024

    Summary

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    Official Symbol
    trpp-8
    Official Full Name
    Trafficking protein particle complex subunit 8
    Primary source
    WormBase:WBGene00018512
    Locus tag
    CELE_F46F11.9
    See related
    AllianceGenome:WB:WBGene00018512
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be part of TRAPPIII protein complex. Orthologous to human TRAPPC8 (trafficking protein particle complex subunit 8). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See trpp-8 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    10
    Sequence:
    Chromosome: I; NC_003279.8 (5610374..5616402, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like protein 5 Neighboring gene putative V-type proton ATPase subunit G Neighboring gene ncRNA Neighboring gene F-box domain-containing protein Neighboring gene CSD domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of TRAPPIII protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Trafficking protein particle complex subunit 8
    NP_491642.2
    • Confirmed by transcript evidence
    NP_491643.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      5610374..5616402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_059242.6 → NP_491643.2  Trafficking protein particle complex subunit 8 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491643.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L043
      Conserved Domains (1) summary
      pfam12739
      Location:128 → 556
      TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit

    2. NM_059241.7 → NP_491642.2  Trafficking protein particle complex subunit 8 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491642.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9BI63
      Conserved Domains (1) summary
      pfam12739
      Location:128 → 558
      TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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