K08F9.3 GH18 domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: K08F9.3
Official Full Name: GH18 domain-containing protein
Primary source: WormBase:WBGene00010686
Locus tag: CELE_K08F9.3
See related: AllianceGenome:WB:WBGene00010686
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in carbohydrate metabolic process. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See K08F9.3 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 6

Sequence:: Chromosome: V; NC_003283.11 (15140547..15144079)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

K08F9.3 (e-PCR)
- UniSTS:305858

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: GH18 domain-containing protein

NP_001263895.1

Partially confirmed by transcript evidence

NP_001263896.1

Confirmed by transcript evidence

NP_001263897.1

Partially confirmed by transcript evidence

NP_506735.3

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

15140547..15144079

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001276966.3 → NP_001263895.1 GH18 domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001263895.1

Status: REVIEWED

UniProtKB/TrEMBL

L8E826

Conserved Domains (2) summary

pfam00704
Location:59 → 209

Glyco_hydro_18; Glycosyl hydrolases family 18

cl10447
Location:61 → 213

GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...
NM_001276967.4 → NP_001263896.1 GH18 domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001263896.1

Status: REVIEWED

UniProtKB/TrEMBL

L8EC39

Conserved Domains (2) summary

pfam00704
Location:93 → 243

Glyco_hydro_18; Glycosyl hydrolases family 18

cl10447
Location:95 → 247

GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...
NM_001276968.3 → NP_001263897.1 GH18 domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001263897.1

Status: REVIEWED

UniProtKB/TrEMBL

L8E972

Conserved Domains (2) summary

pfam00704
Location:122 → 272

Glyco_hydro_18; Glycosyl hydrolases family 18

cl10447
Location:124 → 276

GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...
NM_074334.6 → NP_506735.3 GH18 domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_506735.3

Status: REVIEWED

UniProtKB/TrEMBL

O17940

Conserved Domains (2) summary

pfam00704
Location:109 → 259

Glyco_hydro_18; Glycosyl hydrolases family 18

cl10447
Location:111 → 263

GH18_chitinase-like; The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have ...