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    str-148 Seven TM Receptor [ Caenorhabditis elegans ]

    Gene ID: 173486, updated on 9-Dec-2024

    Summary

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    Official Symbol
    str-148
    Official Full Name
    Seven TM Receptor
    Primary source
    WormBase:WBGene00006195
    Locus tag
    CELE_M01D1.1
    See related
    AllianceGenome:WB:WBGene00006195
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable G protein-coupled olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and olfactory behavior. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in excretory duct cell; excretory pore; and seam cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See str-148 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    8
    Sequence:
    Chromosome: II; NC_003280.10 (1045992..1048319)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene F-box domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. KIN-29 SIK regulates chemoreceptor gene expression via an MEF2 transcription factor and a class II HDAC. van der Linden AM, et al. EMBO J, 2007 Jan 24. PMID 17170704, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in olfactory behavior IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Seven TM Receptor
    NP_001305225.1
    • Confirmed by transcript evidence
    NP_493898.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      1045992..1048319
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061497.5 → NP_493898.1  Seven TM Receptor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493898.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17230
      Conserved Domains (1) summary
      pfam10326
      Location:4 → 308
      7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str

    2. NM_001318296.3 → NP_001305225.1  Seven TM Receptor [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0S4XRR7
      Conserved Domains (1) summary
      cl22924
      Location:1 → 160
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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