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    aly-1 Chromatin target of PRMT1 protein C-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177735, updated on 2-Nov-2024

    Summary

    Official Symbol
    aly-1
    Official Full Name
    Chromatin target of PRMT1 protein C-terminal domain-containing protein
    Primary source
    WormBase:WBGene00000120
    Locus tag
    CELE_C01F6.5
    See related
    AllianceGenome:WB:WBGene00000120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable mRNA binding activity. Predicted to be involved in mRNA export from nucleus. Predicted to be active in nucleus. Orthologous to human ALYREF (Aly/REF export factor). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See aly-1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (9108931..9109753)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Ovule protein Neighboring gene Sex-determination protein fem-3 Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mRNA export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Chromatin target of PRMT1 protein C-terminal domain-containing protein
    NP_501588.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      9108931..9109753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_069187.8NP_501588.1  Chromatin target of PRMT1 protein C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501588.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17561
      Conserved Domains (1) summary
      cl17169
      Location:73144
      RRM_SF; RNA recognition motif (RRM) superfamily