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    clec-42 Deleted in malignant brain tumors 1 protein-like [ Caenorhabditis elegans ]

    Gene ID: 180189, updated on 2-Nov-2024

    Summary

    Official Symbol
    clec-42
    Official Full Name
    Deleted in malignant brain tumors 1 protein-like
    Primary source
    WormBase:WBGene00008891
    Locus tag
    CELE_F16H6.1
    See related
    AllianceGenome:WB:WBGene00008891
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in int1DL; int1DR; int1VL; int1VR; and neurons. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See clec-42 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (18191412..18194168)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene C-type lectin domain-containing protein Neighboring gene ncRNA Neighboring gene C-type lectin domain-containing protein Neighboring gene ShKT domain-containing protein Neighboring gene ncRNA Neighboring gene DRBM domain-containing protein

    General protein information

    Preferred Names
    Deleted in malignant brain tumors 1 protein-like
    NP_507557.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      18191412..18194168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075156.4NP_507557.1  Deleted in malignant brain tumors 1 protein-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507557.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XV91
      Conserved Domains (3) summary
      smart00034
      Location:170289
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      smart00042
      Location:450550
      CUB; Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein
      cd00041
      Location:307399
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.