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    Ier3ip1 immediate early response 3 interacting protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 66191, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ier3ip1provided by MGI
    Official Full Name
    immediate early response 3 interacting protein 1provided by MGI
    Primary source
    MGI:MGI:1913441
    See related
    Ensembl:ENSMUSG00000090000 AllianceGenome:MGI:1913441
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110057H19Rik
    Summary
    Predicted to be involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; positive regulation of secretion by cell; and regulation of fibroblast apoptotic process. Predicted to be located in Golgi apparatus and endoplasmic reticulum. Predicted to be active in COPII-coated ER to Golgi transport vesicle; Golgi membrane; and endoplasmic reticulum membrane. Is expressed in several structures, including clavicle; lung; nervous system; nose; and submandibular gland primordium. Orthologous to human IER3IP1 (immediate early response 3 interacting protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in placenta adult (RPKM 27.5), CNS E18 (RPKM 24.6) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ier3ip1 in Genome Data Viewer
    Location:
    18 E3; 18 51.98 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (77017723..77029310)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (76930027..76941614)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene C2 calcium-dependent domain containing 2-like pseudogene Neighboring gene SKI family transcriptional corepressor 2 Neighboring gene STARR-seq mESC enhancer starr_45102 Neighboring gene STARR-seq mESC enhancer starr_45103 Neighboring gene predicted gene, 32058 Neighboring gene predicted gene, 53183 Neighboring gene haloacid dehalogenase-like hydrolase domain containing 2 Neighboring gene katanin p60 subunit A-like 2 Neighboring gene STARR-seq mESC enhancer starr_45107 Neighboring gene STARR-positive B cell enhancer mm9_chr18:77285922-77286223

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (1)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in brain development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in brain development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in organ growth ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in organ growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of extracellular matrix constituent secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of extracellular matrix constituent secretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein secretion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of fibroblast apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of fibroblast apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in COPII-coated ER to Golgi transport vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    immediate early response 3-interacting protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025409.3NP_079685.1  immediate early response 3-interacting protein 1

      See identical proteins and their annotated locations for NP_079685.1

      Status: VALIDATED

      Source sequence(s)
      AC132608, AK004281, BE985081, CF951253, CX207811
      Consensus CDS
      CCDS37862.1
      UniProtKB/Swiss-Prot
      Q9CR20
      Related
      ENSMUSP00000026487.5, ENSMUST00000026487.6
      Conserved Domains (1) summary
      pfam08571
      Location:582
      Yos1; Yos1-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      77017723..77029310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)