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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001164497.2 → NP_001157969.1 terminal nucleotidyltransferase 4B isoform a
See identical proteins and their annotated locations for NP_001157969.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a). Both variants 1 and 2 encode the same isoform.
- Source sequence(s)
-
AC126034, AC155170
- Consensus CDS
-
CCDS52629.1
- UniProtKB/TrEMBL
- E9QJT6, F6UPY1
- Related
- ENSMUSP00000112766.2, ENSMUST00000119033.8
- Conserved Domains (1) summary
-
- COG5260
Location:181 → 453
- TRF4; DNA polymerase sigma [Replication, recombination and repair]
-
NM_001164498.2 → NP_001157970.1 terminal nucleotidyltransferase 4B isoform a
See identical proteins and their annotated locations for NP_001157970.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1, and encodes the longer isoform (a). Both variants 1 and 2 encode the same isoform.
- Source sequence(s)
-
AC126034, AC155170
- Consensus CDS
-
CCDS52629.1
- UniProtKB/TrEMBL
- E9QJT6, F6UPY1
- Related
- ENSMUSP00000112608.2, ENSMUST00000118952.8
- Conserved Domains (1) summary
-
- COG5260
Location:181 → 453
- TRF4; DNA polymerase sigma [Replication, recombination and repair]
-
NM_001164499.2 → NP_001157971.1 terminal nucleotidyltransferase 4B isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the central coding region, compared to variant 1. The resulting isoform (b) lacks an internal segment, compared to isoform a.
- Source sequence(s)
-
AC126034, AC155170
- Consensus CDS
-
CCDS52630.1
- UniProtKB/TrEMBL
- B7ZMU2, F8WI26
- Related
- ENSMUSP00000067971.4, ENSMUST00000066748.11
- Conserved Domains (1) summary
-
- COG5260
Location:181 → 410
- TRF4; DNA polymerase sigma [Replication, recombination and repair]
-
NM_001372333.2 → NP_001359262.1 terminal nucleotidyltransferase 4B isoform c
Status: VALIDATED
- Source sequence(s)
-
AC126034, AC155170
- UniProtKB/TrEMBL
-
F6UPY1
- Related
- ENSMUSP00000160021.1, ENSMUST00000249924.1
- Conserved Domains (1) summary
-
- COG5260
Location:201 → 473
- TRF4; DNA polymerase sigma [Replication, recombination and repair]
-
NM_001415003.1 → NP_001401932.1 terminal nucleotidyltransferase 4B isoform d
Status: VALIDATED
- Source sequence(s)
-
AC126034, AC155170
- UniProtKB/TrEMBL
-
F6UPY1
- Related
- ENSMUSP00000120503.3, ENSMUST00000154115.3
-
NM_001415004.1 → NP_001401933.1 terminal nucleotidyltransferase 4B isoform e
Status: VALIDATED
- Source sequence(s)
-
AC126034, AC155170
- UniProtKB/Swiss-Prot
- A6H635, Q68ED3, Q8C0K6
- UniProtKB/TrEMBL
-
B7ZMU2
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000074.7 Reference GRCm39 C57BL/6J
- Range
-
88925229..88989942
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006530830.5 → XP_006530893.1 terminal nucleotidyltransferase 4B isoform X1
- UniProtKB/TrEMBL
-
F6UPY1
- Conserved Domains (1) summary
-
- COG5260
Location:201 → 473
- TRF4; DNA polymerase sigma [Replication, recombination and repair]
-
XM_006530833.5 → XP_006530896.1 terminal nucleotidyltransferase 4B isoform X4
- UniProtKB/TrEMBL
-
F6UPY1
- Conserved Domains (1) summary
-
- COG5260
Location:201 → 473
- TRF4; DNA polymerase sigma [Replication, recombination and repair]
-
XM_017312653.2 → XP_017168142.1 terminal nucleotidyltransferase 4B isoform X2
- UniProtKB/TrEMBL
-
B7ZMU2
- Conserved Domains (1) summary
-
- COG5260
Location:201 → 430
- TRF4; DNA polymerase sigma [Replication, recombination and repair]