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    Spmip10 sperm microtubule inner protein 10 [ Mus musculus (house mouse) ]

    Gene ID: 67343, updated on 9-Dec-2024

    Summary

    Official Symbol
    Spmip10provided by MGI
    Official Full Name
    sperm microtubule inner protein 10provided by MGI
    Primary source
    MGI:MGI:1914593
    See related
    Ensembl:ENSMUSG00000032900 AllianceGenome:MGI:1914593
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tex43; Tseg7; 1700065I17Rik
    Summary
    Involved in flagellated sperm motility. Is active in axonemal B tubule inner sheath and sperm flagellum. Orthologous to human SPMIP10 (sperm microtubule inner protein 10). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 20.5), CNS E11.5 (RPKM 11.7) and 11 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Spmip10 in Genome Data Viewer
    Location:
    18 D3; 18 30.66 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (56720690..56727855)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (56587609..56594783)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene glutamate-ammonia ligase (glutamine synthetase) pseudogene Neighboring gene aldehyde dehydrogenase family 7, member A1 Neighboring gene STARR-seq mESC enhancer starr_44664 Neighboring gene microRNA 1258 Neighboring gene phosphorylated adaptor for RNA export Neighboring gene predicted gene, 50288 Neighboring gene STARR-seq mESC enhancer starr_44668 Neighboring gene STARR-positive B cell enhancer ABC_E5662 Neighboring gene predicted gene, 41738

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in flagellated sperm motility IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in flagellated sperm motility IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within flagellated sperm motility IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in axonemal B tubule inner sheath IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in sperm flagellum IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    sperm-associated microtubule inner protein 10
    Names
    testis expressed 43
    testis specific expressed protein 7
    testis-expressed protein 43
    testis-expressed sequence 43 protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026099.3NP_080375.2  sperm-associated microtubule inner protein 10

      See identical proteins and their annotated locations for NP_080375.2

      Status: PROVISIONAL

      Source sequence(s)
      AK006893
      Consensus CDS
      CCDS29260.1
      UniProtKB/Swiss-Prot
      Q9D9I1
      UniProtKB/TrEMBL
      C9W8M4
      Related
      ENSMUSP00000038152.7, ENSMUST00000035640.13
      Conserved Domains (1) summary
      pfam14983
      Location:3141
      DUF4513; Domain of unknown function (DUF4513)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      56720690..56727855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006526175.5XP_006526238.1  sperm-associated microtubule inner protein 10 isoform X1

      Related
      ENSMUSP00000115084.2, ENSMUST00000147775.2
      Conserved Domains (1) summary
      pfam14983
      Location:399
      DUF4513; Domain of unknown function (DUF4513)