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    Tlr12 toll-like receptor 12 [ Mus musculus (house mouse) ]

    Gene ID: 384059, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tlr12provided by MGI
    Official Full Name
    toll-like receptor 12provided by MGI
    Primary source
    MGI:MGI:3045221
    See related
    Ensembl:ENSMUSG00000062545 AllianceGenome:MGI:3045221
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tlr11; Gm1365
    Summary
    Predicted to enable signaling receptor activity. Acts upstream of or within defense response to protozoan. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human TLR12P (toll like receptor 12, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See Tlr12 in Genome Data Viewer
    Location:
    4 D2.2; 4 62.08 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (128509239..128512412, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (128615446..128618619, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene CUB and Sushi multiple domains 2 Neighboring gene predicted gene, 33656 Neighboring gene STARR-positive B cell enhancer ABC_E839 Neighboring gene STARR-seq mESC enhancer starr_11454 Neighboring gene zinc finger and SCAN domains 20 Neighboring gene STARR-seq mESC enhancer starr_11455 Neighboring gene STARR-positive B cell enhancer ABC_E9239 Neighboring gene predicted gene 12958 Neighboring gene STARR-positive B cell enhancer ABC_E6219 Neighboring gene VISTA enhancer mm1684 Neighboring gene polyhomeotic 2 Neighboring gene predicted gene, 33712

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (1)  1 citation

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables NAD+ nucleotidase, cyclic ADP-ribose generating IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to protozoan IMP
    Inferred from Mutant Phenotype
    more info
     
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in toll-like receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    toll-like receptor 12
    Names
    toll-like receptor 11
    NP_991392.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205823.2NP_991392.1  toll-like receptor 12 precursor

      See identical proteins and their annotated locations for NP_991392.1

      Status: VALIDATED

      Source sequence(s)
      AK137624
      Consensus CDS
      CCDS18673.1
      UniProtKB/Swiss-Prot
      Q6QNU9
      UniProtKB/TrEMBL
      A2RRZ9
      Related
      ENSMUSP00000074381.3, ENSMUST00000074829.4
      Conserved Domains (4) summary
      smart00255
      Location:761902
      TIR; Toll - interleukin 1 - resistance
      cd00116
      Location:364625
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:201224
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:342402
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      128509239..128512412 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)