U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjeI DUF4156 domain-containing lipoprotein YjeI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948664, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjeI
    Official Full Name
    DUF4156 domain-containing lipoprotein YjeI
    Primary source
    ECOCYC:G7834
    Locus tag
    b4144
    See related
    ASAP:ABE-0013572
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4138
    Summary
    First 18 aa are a type II signal peptide. [More information is available at EcoGene: EG12471].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4372809..4373162)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cochaperonin GroES Neighboring gene chaperonin GroEL Neighboring gene protein YjeJ Neighboring gene lysine 2,3-aminomutase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Rapid acid treatment of Escherichia coli: transcriptomic response and recovery. Kannan G, et al. BMC Microbiol, 2008 Feb 26. PMID 18302792, Free PMC Article
    2. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    3. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    4. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    5. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF4156 domain-containing lipoprotein YjeI

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4372809..4373162
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418568.2 DUF4156 domain-containing lipoprotein YjeI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418568.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A829LB31, A0AAJ3TZ63, A0AAN3MA05
      Conserved Domains (1) summary
      pfam13698
      Location:24 → 115
      DUF4156; Domain of unknown function (DUF4156)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.