U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    gfcA threonine-rich inner membrane protein GfcA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945029, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    gfcA
    Official Full Name
    threonine-rich inner membrane protein GfcA
    Primary source
    ECOCYC:G6508
    Locus tag
    b0987
    See related
    ASAP:ABE-0003325
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0978; ymcD
    Summary
    Function characterized in enteropathogenic Escherichia coli (EPEC). [More information is available at EcoGene: EG13732]. The operon encoding YmcD, YmcC, YmcB, YmcA, YzzZ, Etp, and Etk was characterized in the enteropathogenic Escherichia coli strain O127:H6. [More information is available at EcoCyc: G6508].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1049439..1049744, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative lipoprotein GfcD Neighboring gene capsule biosynthesis GfcC family protein Neighboring gene lipoprotein GfcB Neighboring gene IS1 family protein InsA Neighboring gene IS1 family protein InsB Neighboring gene CspA family protein CspH

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Biosynthesis and assembly of capsular polysaccharides in Escherichia coli. Whitfield C. Annu Rev Biochem, 2006. PMID 16756484
    2. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    3. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    4. Identification of an Escherichia coli operon required for formation of the O-antigen capsule. Peleg A, et al. J Bacteriol, 2005 Aug. PMID 16030220, Free PMC Article
    5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    threonine-rich inner membrane protein GfcA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1049439..1049744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415507.2 threonine-rich inner membrane protein GfcA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415507.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FL21
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.