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    gfcC capsule biosynthesis GfcC family protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944978, updated on 3-Dec-2024

    Summary

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    Official Symbol
    gfcC
    Official Full Name
    capsule biosynthesis GfcC family protein
    Primary source
    ECOCYC:G6506
    Locus tag
    b0985
    See related
    ASAP:ABE-0003321
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0976; ymcB
    Summary
    Function characterized in enteropathogenic Escherichia coli (EPEC). [More information is available at EcoGene: EG13730]. The operon encoding YmcD, YmcC, YmcB, YmcA, YzzZ, Etp, and Etk was characterized in the enteropathogenic Escherichia coli strain O127:H6. [More information is available at EcoCyc: G6506].
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    Genomic context

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    Sequence:
    NC_000913.3 (1047945..1048691, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein-tyrosine kinase Etk Neighboring gene phosphotyrosine-protein phosphatase Etp Neighboring gene putative exopolysaccharide export lipoprotein GfcE Neighboring gene putative lipoprotein GfcD Neighboring gene lipoprotein GfcB Neighboring gene threonine-rich inner membrane protein GfcA Neighboring gene IS1 family protein InsA Neighboring gene IS1 family protein InsB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biosynthesis and assembly of capsular polysaccharides in Escherichia coli. Whitfield C. Annu Rev Biochem, 2006. PMID 16756484
    2. Identification of an Escherichia coli operon required for formation of the O-antigen capsule. Peleg A, et al. J Bacteriol, 2005 Aug. PMID 16030220, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    capsule biosynthesis GfcC family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1047945..1048691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415505.1 capsule biosynthesis GfcC family protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415505.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7CQI7
      Conserved Domains (1) summary
      pfam06251
      Location:22 → 247
      Caps_synth_GfcC; Capsule biosynthesis GfcC
    Nucleotide Protein
    Heading Accession and Version

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