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    smrA DNA endonuclease SmrA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945953, updated on 3-Dec-2024

    Summary

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    Official Symbol
    smrA
    Official Full Name
    DNA endonuclease SmrA
    Primary source
    ECOCYC:G6672
    Locus tag
    b1340
    See related
    ASAP:ABE-0004502
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1337; ydaL
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    Genomic context

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    Sequence:
    NC_000913.3 (1405979..1406542)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative LysR-type DNA-binding transcriptional regulator AbgR Neighboring gene ncRNA Neighboring gene diguanylate cyclase DgcM Neighboring gene protein YnaN

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli. Gui WJ, et al. J Struct Biol, 2011 May. PMID 21276852
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli
      Title: Crystal structure of YdaL, a stand-alone small MutS-related protein from Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA endonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA endonuclease activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DNA endonuclease SmrA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1405979..1406542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415856.1 DNA endonuclease SmrA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415856.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376JZ38, A0A376MWN2
      Conserved Domains (1) summary
      NF033154
      Location:4 → 185
      endonuc_SmrA; DNA endonuclease SmrA
    Nucleotide Protein
    Heading Accession and Version

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