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    wcaM putative colanic acid biosynthesis protein WcaM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946561, updated on 17-Dec-2024

    Summary

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    Official Symbol
    wcaM
    Official Full Name
    putative colanic acid biosynthesis protein WcaM
    Primary source
    ECOCYC:G7094
    Locus tag
    b2043
    See related
    ASAP:ABE-0006774
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2037; yefK
    Summary
    Verified Tat substrate: [More information is available at EcoGene: EG12651]. Sequence similarity suggests that YefK may contain -barrel structure(s) . [More information is available at EcoCyc: G7094].
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    Genomic context

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    Sequence:
    NC_000913.3 (2114502..2115896, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene dTDP-4-dehydrorhamnose reductase Neighboring gene dTDP-glucose 4,6-dehydratase 1 Neighboring gene UTP:glucose-1-phosphate uridylyltransferase, low activity Neighboring gene putative colanic acid biosynthesis glycosyl transferase WcaL Neighboring gene colanic acid biosynthesis pyruvyl transferase WcaK Neighboring gene colanic acid repeat unit flippase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pathfinders and trailblazers: a prokaryotic targeting system for transport of folded proteins. Sargent F, et al. FEMS Microbiol Lett, 2006 Jan. PMID 16445746
    2. Protein targeting by the bacterial twin-arginine translocation (Tat) pathway. Berks BC, et al. Curr Opin Microbiol, 2005 Apr. PMID 15802249
    3. The Tat protein translocation pathway and its role in microbial physiology. Berks BC, et al. Adv Microb Physiol, 2003. PMID 14560665
    4. Oligomeric properties and signal peptide binding by Escherichia coli Tat protein transport complexes. de Leeuw E, et al. J Mol Biol, 2002 Oct 4. PMID 12367533
    5. Export of complex cofactor-containing proteins by the bacterial Tat pathway. Palmer T, et al. Trends Microbiol, 2005 Apr. PMID 15817387

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in lipopolysaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in slime layer polysaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative colanic acid biosynthesis protein WcaM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2114502..2115896 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416547.1 putative colanic acid biosynthesis protein WcaM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416547.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8H9XM22, A0A8S7EDW5, A0A8S7FET9
      Conserved Domains (1) summary
      PRK10123
      Location:1 → 464
      wcaM; putative colanic acid biosynthesis protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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