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    fkpB peptidyl-prolyl cis-trans isomerase FkpB [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944807, updated on 3-Dec-2024

    Summary

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    Official Symbol
    fkpB
    Official Full Name
    peptidyl-prolyl cis-trans isomerase FkpB
    Primary source
    ECOCYC:EG11080
    Locus tag
    b0028
    See related
    ASAP:ABE-0000101
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0029; slpA; yaaD
    Summary
    FkpB is a FK506-binding protein type of peptidyl-prolyl cis/trans-isomerases (PPIase) . [More information is available at EcoCyc: EG11080].
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    Genomic context

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    Sequence:
    NC_000913.3 (25826..26275)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene isoleucine--tRNA ligase Neighboring gene lipoprotein signal peptidase Neighboring gene 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Neighboring gene ribonucleoside hydrolase RihC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High-resolution insights into binding of unfolded polypeptides by the PPIase chaperone SlpA. Quistgaard EM, et al. FASEB J, 2012 Oct. PMID 22735173
    2. The Escherichia coli SlyD is a metal ion-regulated peptidyl-prolyl cis/trans-isomerase. Hottenrott S, et al. J Biol Chem, 1997 Jun 20. PMID 9188461
    3. Nucleotide sequence of the Escherichia coli prolipoprotein signal peptidase (lsp) gene. Innis MA, et al. Proc Natl Acad Sci U S A, 1984 Jun. PMID 6374664, Free PMC Article
    4. Mapping of the lipoprotein signal peptidase gene (lsp). Regue M, et al. J Bacteriol, 1984 May. PMID 6373724, Free PMC Article
    5. Identification of prolipoprotein signal peptidase and genomic organization of the lsp gene in Escherichia coli. Tokunaga M, et al. J Biol Chem, 1985 May 10. PMID 2580835

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables RNA polymerase II CTD heptapeptide repeat P3 isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables RNA polymerase II CTD heptapeptide repeat P6 isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidyl-prolyl cis-trans isomerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables peptidyl-prolyl cis-trans isomerase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within chaperone-mediated protein folding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein refolding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase FkpB
    NP_414569.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      25826..26275
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414569.1 peptidyl-prolyl cis-trans isomerase FkpB [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414569.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1KW22
      Conserved Domains (1) summary
      PRK15095
      Location:1 → 149
      PRK15095; FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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