U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    agaV N-acetyl-D-galactosamine specific PTS enzyme IIB component [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947648, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    agaV
    Official Full Name
    N-acetyl-D-galactosamine specific PTS enzyme IIB component
    Primary source
    ECOCYC:G7632
    Locus tag
    b3133
    See related
    ASAP:ABE-0010297
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3121; yhaY
    Summary
    agaV encodes Enzyme IIBAga of the N-acetyl-galactosamine (Aga) phosphotransferase system (PTS). agaW encodes Enzyme IICAga of the Aga PTS. [More information is available at EcoCyc: G7632].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3280217..3280690)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor AgaR Neighboring gene putative tagatose-1,6-bisphosphate aldolase 1 chaperone Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Application of AgaR repressor and dominant repressor variants for verification of a gene cluster involved in N-acetylgalactosamine metabolism in Escherichia coli K-12. Ray WK, et al. Mol Microbiol, 2004 Feb. PMID 14731281
    2. Novel phosphotransferase genes revealed by bacterial genome sequencing: a gene cluster encoding a putative N-acetylgalactosamine metabolic pathway in Escherichia coli. Reizer J, et al. Microbiology (Reading), 1996 Feb. PMID 8932697
    3. Pathways for the utilization of N-acetyl-galactosamine and galactosamine in Escherichia coli. Brinkkötter A, et al. Mol Microbiol, 2000 Jul. PMID 10931310
    4. Phosphoenolpyruvate:carbohydrate phosphotransferase systems of bacteria. Postma PW, et al. Microbiol Rev, 1993 Sep. PMID 8246840, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    N-acetyl-D-galactosamine specific PTS enzyme IIB component

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3280217..3280690
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417602.4 N-acetyl-D-galactosamine specific PTS enzyme IIB component [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417602.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376WSD4
      Conserved Domains (1) summary
      PRK11425
      Location:1 → 157
      PRK11425; PTS N-acetylgalactosamine transporter subunit IIB
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.