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    Spmap1 sperm microtubule associated protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 72215, updated on 9-Dec-2024

    Summary

    Official Symbol
    Spmap1provided by MGI
    Official Full Name
    sperm microtubule associated protein 1provided by MGI
    Primary source
    MGI:MGI:1919465
    See related
    Ensembl:ENSMUSG00000018543 AllianceGenome:MGI:1919465
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700001P01Rik
    Summary
    Orthologous to human SPMAP1 (sperm microtubule associated protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis adult (RPKM 57.6) See more
    Orthologs
    NEW
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    Genomic context

    See Spmap1 in Genome Data Viewer
    Location:
    11 D; 11 61.1 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (97662307..97666744, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (97771481..97775918, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ATP synthase, H+ transporting, mitochondrial FO complex, subunit G2, pseudogene Neighboring gene nuclear encoded tRNA cysteine 18 (anticodon GCA) Neighboring gene ribosomal protein L23 Neighboring gene STARR-positive B cell enhancer ABC_E5272 Neighboring gene small nucleolar RNA, H/ACA box 21 Neighboring gene STARR-seq mESC enhancer starr_30635 Neighboring gene nuclear encoded tRNA cysteine 56 (anticodon GCA)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    sperm microtubule associated protein 1
    Names
    uncharacterized protein C17orf98 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028156.3NP_082432.2  sperm microtubule associated protein 1

      See identical proteins and their annotated locations for NP_082432.2

      Status: VALIDATED

      Source sequence(s)
      AL596446
      Consensus CDS
      CCDS36297.1
      UniProtKB/Swiss-Prot
      Q80ZQ1, Q9DAQ5
      Related
      ENSMUSP00000103202.2, ENSMUST00000107576.2
      Conserved Domains (1) summary
      pfam15075
      Location:12144
      DUF4542; Domain of unknown function (DUF4542)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      97662307..97666744 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)