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    6030443J06Rik RIKEN cDNA 6030443J06 gene [ Mus musculus (house mouse) ]

    Gene ID: 320719, updated on 22-Oct-2024

    Summary

    Official Symbol
    6030443J06Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 6030443J06 geneprovided by MGI
    Primary source
    MGI:MGI:2444595
    See related
    Ensembl:ENSMUSG00000097207 AllianceGenome:MGI:2444595
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700030G06Rik
    Expression
    Broad expression in testis adult (RPKM 1.5), limb E14.5 (RPKM 0.3) and 16 other tissues See more
    NEW
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    Genomic context

    See 6030443J06Rik in Genome Data Viewer
    Location:
    5 A3; 5 10.07 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (22755411..22763169)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (22550413..22558171)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene origin recognition complex, subunit 5 Neighboring gene ribosomal protein L22 like 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_12587 Neighboring gene STARR-seq mESC enhancer starr_12588 Neighboring gene predicted gene, 22887 Neighboring gene STARR-seq mESC enhancer starr_12589 Neighboring gene predicted gene, 42225 Neighboring gene STARR-seq mESC enhancer starr_12591 Neighboring gene ubiquitin-conjugating enzyme E2 L3 pseudogene Neighboring gene ribosomal protein L17, pseudogene 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_102315.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK029857, AV271716, BE864128, CF743844
      Related
      ENSMUST00000181764.9

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      22755411..22763169
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)