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    ygeG TPR repeat-containing putative chaperone YgeG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946986, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ygeG
    Official Full Name
    TPR repeat-containing putative chaperone YgeG
    Primary source
    ECOCYC:G7471
    Locus tag
    b2851
    See related
    ASAP:ABE-0009364
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2849
    Summary
    This gene is a remnant of the type three secretion system (T3SS) pathogenicity island ETT2. [More information is available at EcoGene: EG13037]. ygeG is located within a remnant of an ETT2 (type III secretion system) pathogenicity island that is fully present in pathogenic strains such as Escherichia coli O157:H7 and at least partially present in most sequenced Escherichia coli and Shigella strains . [More information is available at EcoCyc: G7471].
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    Genomic context

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    Sequence:
    NC_000913.3 (2991268..2991759)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene protein YqeK Neighboring gene pseudo Neighboring gene putative transcriptional regulator YgeH Neighboring gene protein YgeI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition. Ren CP, et al. J Bacteriol, 2004 Jun. PMID 15150243, Free PMC Article
    2. A degenerate type III secretion system from septicemic Escherichia coli contributes to pathogenesis. Ideses D, et al. J Bacteriol, 2005 Dec. PMID 16291689, Free PMC Article
    3. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    TPR repeat-containing putative chaperone YgeG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2991268..2991759
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417328.1 TPR repeat-containing putative chaperone YgeG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417328.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MHA5
      Conserved Domains (2) summary
      sd00006
      Location:44 → 68
      TPR; TPR repeat [structural motif]
      cl30292
      Location:11 → 157
      PRK15331; type III secretion system translocator chaperone SicA
    Nucleotide Protein
    Heading Accession and Version

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