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    yjaA stress response protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948515, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjaA
    Official Full Name
    stress response protein
    Primary source
    ECOCYC:EG11206
    Locus tag
    b4011
    See related
    ASAP:ABE-0013112
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4003
    Summary
    The yjaA gene has been used as a marker for phylogenetic analysis . [More information is available at EcoCyc: EG11206].
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    Genomic context

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    Sequence:
    NC_000913.3 (4213234..4213617)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 23S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene peptidyl-lysine N-acetyltransferase YjaB Neighboring gene homoserine O-succinyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method. Gordon DM, et al. Environ Microbiol, 2008 Oct. PMID 18518895
    2. Rapid and simple determination of the Escherichia coli phylogenetic group. Clermont O, et al. Appl Environ Microbiol, 2000 Oct. PMID 11010916, Free PMC Article
    3. Identification of virulence genes linked with diarrhea due to atypical enteropathogenic Escherichia coli by DNA microarray analysis and PCR. Afset JE, et al. J Clin Microbiol, 2006 Oct. PMID 17021100, Free PMC Article
    4. The sequence of the distal end of the E. coli ribosomal RNA rrnE operon indicates conserved features are shared by rrn operons. Liebke H, et al. Nucleic Acids Res, 1985 Aug 12. PMID 2412207, Free PMC Article
    5. Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes. Blattner FR, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265357, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to acidic pH IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular response to hydrogen peroxide IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation on inanimate substrate IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stress response protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4213234..4213617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418435.1 stress response protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418435.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3J8X9
      Conserved Domains (1) summary
      PRK10039
      Location:1 → 127
      PRK10039; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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