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    yphG DUF5107 domain-containing protein YphG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947021, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yphG
    Official Full Name
    DUF5107 domain-containing protein YphG
    Primary source
    ECOCYC:G7343
    Locus tag
    b2549
    See related
    ASAP:ABE-0008380
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2546
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    Genomic context

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    Sequence:
    NC_000913.3 (2679464..2682745, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative ABC transporter ATP-binding protein YphE Neighboring gene putative ABC transporter periplasmic binding protein YphF Neighboring gene putative DNA-binding transcriptional regulator, NAGC-like Neighboring gene serine hydroxymethyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF5107 domain-containing protein YphG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2679464..2682745 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417044.4 DUF5107 domain-containing protein YphG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417044.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8QTJ3
      Conserved Domains (3) summary
      TIGR02917
      Location:491 → 867
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:495 → 523
      TPR; TPR repeat [structural motif]
      pfam17128
      Location:40 → 343
      DUF5107; Domain of unknown function (DUF5107)
    Nucleotide Protein
    Heading Accession and Version

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