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    msopa male-specific opa containing gene [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 45962, updated on 9-Dec-2024

    Summary

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    Official Symbol
    msopaprovided by FlyBase
    Official Full Name
    male-specific opa containing geneprovided by FlyBase
    Primary source
    FLYBASE:FBgn0004414
    Locus tag
    Dmel_CG14560
    See related
    AllianceGenome:FB:FBgn0004414
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG14560; Dmel\CG14560
    Summary
    Involved in sexual reproduction. Located in extracellular space. Is expressed in several structures, including adult hemolymph; epithelial tube; female reproductive system; ovary; and uterus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See msopa in Genome Data Viewer
    Location:
    79B2-79B3; 3-47 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22082720..22083367)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22075820..22076467)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Ribosomal protein LP0 Neighboring gene Seminal fluid protein 79 Neighboring gene long non-coding RNA:CR45236 Neighboring gene olf413 Neighboring gene long non-coding RNA:CR45971

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Drosophila gene containing the opa repetitive element is exclusively expressed in adult male abdomens. Grabowski DT, et al. Nucleic Acids Res, 1991 Apr 11. PMID 1674131, Free PMC Article
    2. An adult male specific gene in Drosophila containing the repetitive element opa. Grabowski DT, et al. Biochim Biophys Acta, 1991 Aug 27. PMID 1883837
    3. Associations between sperm competition and natural variation in male reproductive genes on the third chromosome of Drosophila melanogaster. Fiumera AC, et al. Genetics, 2007 Jun. PMID 17435238, Free PMC Article
    4. Fates and targets of male accessory gland proteins in mated female Drosophila melanogaster. Ravi Ram K, et al. Insect Biochem Mol Biol, 2005 Sep. PMID 15979005
    5. Seminal fluid gene expression and reproductive fitness in Drosophila melanogaster. Patlar B, et al. BMC Ecol Evol, 2022 Feb 23. PMID 35196983, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    male-specific opa containing gene
    Names
    CG14560-PA
    CG14560-PB
    dromsopa
    drosophila male specific opa containing gene
    msopa-PA
    msopa-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      22082720..22083367
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275274.1 → NP_001262203.1  male-specific opa containing gene, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262203.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P23488, Q9VNV8
      UniProtKB/TrEMBL
      M9PIK6, Q4V3I7

    2. NM_080120.3 → NP_524859.2  male-specific opa containing gene, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524859.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P23488, Q9VNV8
      UniProtKB/TrEMBL
      M9PIK6, Q4V3I7
      Related
      FBpp0078135
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PIK6 M9PIK6
    P23488.2 P23488

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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