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    CG42258 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32196, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG42258provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259143
    Locus tag
    Dmel_CG42258
    See related
    AllianceGenome:FB:FBgn0259143
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE29468; CG15926; CG17788; Dmel\CG42258; Pripl4
    Old locus tag
    Dmel_CG15926; Dmel_CG17788
    Summary
    Located in plasma membrane. Is expressed in adult brain; adult brain cell body rind; and adult head. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG42258 in Genome Data Viewer
    Location:
    11A11-11A11; 1-38 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (12463528..12478431)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (12357561..12372464)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rab40 Neighboring gene Cuticular protein 11A Neighboring gene Larval serum protein 1 alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Exploring strategies for protein trapping in Drosophila. Quiñones-Coello AT, et al. Genetics, 2007 Mar. PMID 17179094, Free PMC Article
    2. Mononuclear muscle cells in Drosophila ovaries revealed by GFP protein traps. Hudson AM, et al. Dev Biol, 2008 Feb 15. PMID 18199432, Free PMC Article
    3. Loss of PAFAH1B2 reduces amyloid-β generation by promoting the degradation of amyloid precursor protein C-terminal fragments. Page RM, et al. J Neurosci, 2012 Dec 12. PMID 23238734, Free PMC Article
    4. Mitf is a master regulator of the v-ATPase, forming a control module for cellular homeostasis with v-ATPase and TORC1. Zhang T, et al. J Cell Sci, 2015 Aug 1. PMID 26092939, Free PMC Article
    5. The genetic basis for variation in resistance to infection in the Drosophila melanogaster genetic reference panel. Wang JB, et al. PLoS Pathog, 2017 Mar. PMID 28257468, Free PMC Article

    See all (33) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables histone acetyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42258-PC
    CG42258-PD
    CG42258-PE
    CG42258-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      12463528..12478431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132573.3 → NP_572801.2  uncharacterized protein Dmel_CG42258, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572801.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VYM7

    2. NM_001298226.1 → NP_001285155.1  uncharacterized protein Dmel_CG42258, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285155.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SWS2, Q9VYM6

    3. NM_132574.3 → NP_572802.1  uncharacterized protein Dmel_CG42258, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572802.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SWS2, Q9VYM6

    4. NM_001298225.1 → NP_001285154.1  uncharacterized protein Dmel_CG42258, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285154.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JEY3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SWS2 Q8SWS2
    Q9VYM7 Q9VYM7
    X2JEY3 X2JEY3

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