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    CG15172 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35167, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG15172provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032740
    Locus tag
    Dmel_CG15172
    See related
    AllianceGenome:FB:FBgn0032740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15172
    Orthologs
    all
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    Genomic context

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    See CG15172 in Genome Data Viewer
    Location:
    37B9-37B9; 2-54 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19022417..19023646)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19022417..19023646)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45292 Neighboring gene long non-coding RNA:CR44184 Neighboring gene long non-coding RNA:CR43700 Neighboring gene similar to Deadpan

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
    2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    3. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    4. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    5. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15172-PA
    CG15172-PB
    CG15172-PC
    CG15172-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      19022417..19023646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273622.1 → NP_001260551.1  uncharacterized protein Dmel_CG15172, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260551.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ17

    2. NM_136088.2 → NP_609932.1  uncharacterized protein Dmel_CG15172, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609932.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ17
      Related
      FBpp0080684

    3. NM_001273624.1 → NP_001260553.1  uncharacterized protein Dmel_CG15172, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260553.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ17

    4. NM_001273623.1 → NP_001260552.1  uncharacterized protein Dmel_CG15172, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260552.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VJ17
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VJ17 Q9VJ17

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