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    Obp58c Odorant-binding protein 58c [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37608, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp58cprovided by FlyBase
    Official Full Name
    Odorant-binding protein 58cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034769
    Locus tag
    Dmel_CG13524
    See related
    AllianceGenome:FB:FBgn0034769
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AAF46892; CG13524; DmelObp58c; Dmel\CG13524
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp58c in Genome Data Viewer
    Location:
    59A3-59A3; 2-101 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (22705872..22706678, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (18593377..18594183, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Odorant-binding protein 59a Neighboring gene Odorant-binding protein 58b Neighboring gene antisense RNA:CR43735 Neighboring gene Odorant-binding protein 58d Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Calponin homology domains at a glance. Korenbaum E, et al. J Cell Sci, 2002 Sep 15. PMID 12186940
    2. Functional dissection of Odorant binding protein genes in Drosophila melanogaster. Swarup S, et al. Genes Brain Behav, 2011 Aug. PMID 21605338, Free PMC Article
    3. "Plus-C" odorant-binding protein genes in two Drosophila species and the malaria mosquito Anopheles gambiae. Zhou JJ, et al. Gene, 2004 Feb 18. PMID 14960367
    4. Uncovering the functional constraints underlying the genomic organization of the odorant-binding protein genes. Librado P, et al. Genome Biol Evol, 2013. PMID 24148943, Free PMC Article
    5. Genome-wide analysis of the odorant-binding protein gene family in Drosophila melanogaster. Hekmat-Scafe DS, et al. Genome Res, 2002 Sep. PMID 12213773, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 58c
    Names
    CG13524-PA
    Obp58c-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      22705872..22706678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137866.2 → NP_611710.1  Odorant-binding protein 58c [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611710.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W208
      Related
      FBpp0071831
      Conserved Domains (1) summary
      cl11600
      Location:47 → 135
      PBP_GOBP; PBP/GOBP family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W208 Q9W208

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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