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    Cpr78E Cuticular protein 78E [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40408, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cpr78Eprovided by FlyBase
    Official Full Name
    Cuticular protein 78Eprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037114
    Locus tag
    Dmel_CG7160
    See related
    AllianceGenome:FB:FBgn0037114
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LP06027; CG7160; Cpi78E; DmelCpr78E; Dmel\CG7160
    Summary
    Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be active in chitin-based extracellular matrix. Is expressed in wing disc. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Cpr78E in Genome Data Viewer
    Location:
    78E2-78E2; 3-47 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (21666452..21666980, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (21659552..21660080, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45956 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43977 Neighboring gene long non-coding RNA:CR45920 Neighboring gene mir-316 stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Growth inhibition and differences in protein profiles in azadirachtin-treated Drosophila melanogaster larvae. Wang H, et al. Electrophoresis, 2014 Apr. PMID 24458307
    2. Predicting spatial and temporal gene expression using an integrative model of transcription factor occupancy and chromatin state. Wilczynski B, et al. PLoS Comput Biol, 2012. PMID 23236268, Free PMC Article
    3. Drosophila Sirt2/mammalian SIRT3 deacetylates ATP synthase β and regulates complex V activity. Rahman M, et al. J Cell Biol, 2014 Jul 21. PMID 25023514, Free PMC Article
    4. SAGA-mediated H2B deubiquitination controls the development of neuronal connectivity in the Drosophila visual system. Weake VM, et al. EMBO J, 2008 Jan 23. PMID 18188155, Free PMC Article
    5. The Spalt Transcription Factors Generate the Transcriptional Landscape of the Drosophila melanogaster Wing Pouch Central Region. Organista MF, et al. PLoS Genet, 2015 Aug. PMID 26241320, Free PMC Article

    See all (36) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of chitin-based larval cuticle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of chitin-based larval cuticle ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chitin-based cuticle development ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in chitin-based extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in chitin-based extracellular matrix ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cuticular protein 78E
    Names
    CG7160-PA
    Cpr78E-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      21666452..21666980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141088.2 → NP_649345.1  cuticular protein 78E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649345.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VP00
      Related
      FBpp0078117
      Conserved Domains (1) summary
      pfam00379
      Location:47 → 102
      Chitin_bind_4; Insect cuticle protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VP00 Q9VP00

    Gene LinkOut

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