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    CG5402 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43306, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5402provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039521
    Locus tag
    Dmel_CG5402
    See related
    AllianceGenome:FB:FBgn0039521
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.87; Dmel\CG5402
    Summary
    Involved in sexual reproduction. Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5402 in Genome Data Viewer
    Location:
    98A3-98A3; 3-94 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (27502090..27502956, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (23327812..23328678, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Gustatory receptor 98a Neighboring gene long non-coding RNA:CR46086 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell biology. Wnt signaling glows with RNAi. Fearon ER, et al. Science, 2005 May 6. PMID 15879199
    2. Functional genomic analysis of the Wnt-wingless signaling pathway. DasGupta R, et al. Science, 2005 May 6. PMID 15817814
    3. Genome-wide patterns of local adaptation in Western European Drosophila melanogaster natural populations. Mateo L, et al. Sci Rep, 2018 Nov 1. PMID 30385770, Free PMC Article
    4. Single-nucleus transcriptomes reveal evolutionary and functional properties of cell types in the Drosophila accessory gland. Majane AC, et al. Genetics, 2022 Feb 4. PMID 34849871, Free PMC Article
    5. Proteomics reveals novel Drosophila seminal fluid proteins transferred at mating. Findlay GD, et al. PLoS Biol, 2008 Jul 29. PMID 18666829, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5402-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      27502090..27502956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143308.2 → NP_651565.1  uncharacterized protein Dmel_CG5402 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651565.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VB29
      Related
      FBpp0084583
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VB29 Q9VB29

    Gene LinkOut

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