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    CG6495 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34486, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6495provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0027550
    Locus tag
    Dmel_CG6495
    See related
    AllianceGenome:FB:FBgn0027550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH10711; Dmel\CG6495; GH10711
    Summary
    Is expressed in adult head; embryonic brain; larval nervous system; and larval ventral nerve cord. Orthologous to human LRP11 (LDL receptor related protein 11). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6495 in Genome Data Viewer
    Location:
    32A5-32A5; 2-43 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10761116..10764971)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10761116..10764971)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene mir-4970 stem loop Neighboring gene uncharacterized protein Neighboring gene mir-9378 stem loop Neighboring gene Ubiquitin conjugating enzyme 2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Geographical delimitation of a partial selective sweep in African Drosophila melanogaster. Frezal L, et al. Mol Ecol, 2012 Dec. PMID 23110353
    2. Evidence of a high rate of selective sweeps in African Drosophila melanogaster. Mousset S, et al. Genetics, 2003 Feb. PMID 12618399, Free PMC Article
    3. Drosophila glucome screening identifies Ck1alpha as a regulator of mammalian glucose metabolism. Ugrankar R, et al. Nat Commun, 2015 May 21. PMID 25994086, Free PMC Article
    4. Reproductive status alters transcriptomic response to infection in female Drosophila melanogaster. Short SM, et al. G3 (Bethesda), 2013 May 20. PMID 23550122, Free PMC Article
    5. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6495-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10761116..10764971
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135607.3 → NP_609451.1  uncharacterized protein Dmel_CG6495 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609451.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9Y110
      Related
      FBpp0079703
      Conserved Domains (2) summary
      cd00112
      Location:218 → 249
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam07502
      Location:47 → 129
      MANEC; MANEC domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8I053 Q8I053
    Q8I054 Q8I054
    Q8I0J7 Q8I0J7
    Q8ITK6 Q8ITK6
    Q8ITK7 Q8ITK7
    Q8ITK8 Q8ITK8
    Q8ITK9 Q8ITK9
    Q8ITL0 Q8ITL0
    Q9Y110 Q9Y110

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