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    CG5174 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37117, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5174provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034345
    Locus tag
    Dmel_CG5174
    See related
    AllianceGenome:FB:FBgn0034345
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE18604; BcDNA:RH27395; Dmel\CG5174
    Summary
    Predicted to be active in cytoplasm. Is expressed in adult head; adult heart; and organism. Orthologous to several human genes including TPD52L2 (TPD52 like 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5174 in Genome Data Viewer
    Location:
    55C8-55C9; 2-85 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18421413..18426221)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14308918..14313726)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Glutathione S transferase E9 Neighboring gene immune deficiency Neighboring gene Dodeca-satellite-binding protein 1 Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class O Neighboring gene TRPL translocation defect 14 Neighboring gene scruin like at the midline

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SWI/SNF interacts with cleavage and polyadenylation factors and facilitates pre-mRNA 3' end processing. Yu S, et al. Nucleic Acids Res, 2018 Sep 19. PMID 29860334, Free PMC Article
    2. Quantitative Proteomics Reveals Extensive Changes in the Ubiquitinome after Perturbation of the Proteasome by Targeted dsRNA-Mediated Subunit Knockdown in Drosophila. Sap KA, et al. J Proteome Res, 2017 Aug 4. PMID 28665616
    3. The SLC36 transporter Pathetic is required for extreme dendrite growth in Drosophila sensory neurons. Lin WY, et al. Genes Dev, 2015 Jun 1. PMID 26063572, Free PMC Article
    4. Computational identification of Ftz/Ftz-F1 downstream target genes. Bowler T, et al. Dev Biol, 2006 Nov 1. PMID 16996052
    5. A visual screen for diet-regulated proteins in the Drosophila ovary using GFP protein trap lines. Hsu HJ, et al. Gene Expr Patterns, 2017 Jan. PMID 28093350, Free PMC Article

    See all (44) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5174-PA
    CG5174-PB
    CG5174-PG
    CG5174-PH
    CG5174-PJ
    CG5174-PL
    CG5174-PM
    CG5174-PN
    CG5174-PO
    CG5174-PP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18421413..18426221
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_166285.5 → NP_725790.2  uncharacterized protein Dmel_CG5174, isoform M [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725790.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB79, Q8IGG3
      Conserved Domains (1) summary
      pfam04201
      Location:25 → 184
      TPD52; Tumour protein D52 family

    2. NM_001259477.2 → NP_001246406.1  uncharacterized protein Dmel_CG5174, isoform N [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246406.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K7G1, Q95RC4
      Conserved Domains (1) summary
      pfam04201
      Location:11 → 167
      TPD52; Tumour protein D52 family

    3. NM_137487.6 → NP_611331.2  uncharacterized protein Dmel_CG5174, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611331.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB80, Q95RC4
      Related
      FBpp0085865
      Conserved Domains (1) summary
      pfam04201
      Location:11 → 190
      TPD52; Tumour protein D52 family

    4. NM_166283.3 → NP_725788.1  uncharacterized protein Dmel_CG5174, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725788.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB77, Q95RC4
      Related
      FBpp0085863
      Conserved Domains (1) summary
      pfam04201
      Location:11 → 167
      TPD52; Tumour protein D52 family

    5. NM_166286.5 → NP_725791.1  uncharacterized protein Dmel_CG5174, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725791.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JRI6, Q95RC4
      Related
      FBpp0085866
      Conserved Domains (1) summary
      pfam04201
      Location:11 → 170
      TPD52; Tumour protein D52 family

    6. NM_166284.3 → NP_725789.1  uncharacterized protein Dmel_CG5174, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725789.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB78
      Related
      FBpp0085868
      Conserved Domains (1) summary
      pfam04201
      Location:11 → 147
      TPD52; Tumour protein D52 family

    7. NM_001169723.2 → NP_001163194.1  uncharacterized protein Dmel_CG5174, isoform L [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163194.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JGL5, Q95RC4
      Conserved Domains (1) summary
      pfam04201
      Location:12 → 191
      TPD52; Tumour protein D52 family

    8. NM_001259478.2 → NP_001246407.1  uncharacterized protein Dmel_CG5174, isoform O [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246407.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K897
      Conserved Domains (1) summary
      pfam04201
      Location:158 → 314
      TPD52; Tumour protein D52 family

    9. NM_166288.5 → NP_725793.1  uncharacterized protein Dmel_CG5174, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_725793.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZB83
      Related
      FBpp0085869
      Conserved Domains (1) summary
      pfam04201
      Location:158 → 337
      TPD52; Tumour protein D52 family

    10. NM_001299645.1 → NP_001286574.1  uncharacterized protein Dmel_CG5174, isoform P [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286574.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LGX1
      Conserved Domains (1) summary
      pfam04201
      Location:154 → 310
      TPD52; Tumour protein D52 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4K7G1 A0A0B4K7G1
    A0A0B4K897 A0A0B4K897
    A0A0B4LGX1 A0A0B4LGX1
    A1ZB77 A1ZB77
    A1ZB78 A1ZB78
    A1ZB79 A1ZB79
    A1ZB80 A1ZB80
    A1ZB83 A1ZB83
    E1JGL5 E1JGL5
    Q7JRI6 Q7JRI6
    Q8IGG3 Q8IGG3
    Q95RC4 Q95RC4

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