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    1700108F19Rik RIKEN cDNA 1700108F19 gene [ Mus musculus (house mouse) ]

    Gene ID: 73272, updated on 22-Oct-2024

    Summary

    Official Symbol
    1700108F19Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700108F19 geneprovided by MGI
    Primary source
    MGI:MGI:1920814
    See related
    Ensembl:ENSMUSG00000101009 AllianceGenome:MGI:1920814
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700020I02Rik
    Expression
    Restricted expression toward testis adult (RPKM 11.6) See more
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    Genomic context

    See 1700108F19Rik in Genome Data Viewer
    Location:
    14 D3; 14 40.63 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (76915008..76924548)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (76677568..76687108)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene FK506 binding protein 1a, pseudogene 1 Neighboring gene RIKEN cDNA 1700105F02 gene Neighboring gene STARR-seq mESC enhancer starr_37190 Neighboring gene STARR-seq mESC enhancer starr_37191 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:77087838-77088021 Neighboring gene CapStarr-seq enhancer MGSCv37_chr14:77088050-77088237 Neighboring gene predicted gene, 51403 Neighboring gene RIKEN cDNA 4930431P22 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015485.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK006165, AK007133, BY707214
      Related
      ENSMUST00000191266.8

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      76915008..76924548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)