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    fimF type 1 fimbriae minor subunit FimF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948845, updated on 17-Dec-2024

    Summary

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    Official Symbol
    fimF
    Official Full Name
    type 1 fimbriae minor subunit FimF
    Primary source
    ECOCYC:EG10313
    Locus tag
    b4318
    See related
    ASAP:ABE-0014153
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4309
    Summary
    One of 25 FimA homologs in EcoGene. [More information is available at EcoGene: EG10313]. FimF is a minor component of the type 1 fimbriae in Escherichia coli Two-dimensional gel electrophoresis indicated that FimF has a molecular weight of 18.0 kDa and exists in a 1:100 ratio with the major fimbrial subunit, FimA . [More information is available at EcoCyc: EG10313].
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    Genomic context

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    Sequence:
    NC_000913.3 (4547742..4548272)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene type 1 fimbriae periplasmic chaperone Neighboring gene type I fimbriae usher protein Neighboring gene type 1 fimbriae minor subunit FimG Neighboring gene type 1 fimbriae D-mannose specific adhesin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NMR assignment of the E. coli type 1 pilus protein FimF. Gossert AD, et al. J Biomol NMR, 2007 Jun. PMID 17417715
    2. Infinite kinetic stability against dissociation of supramolecular protein complexes through donor strand complementation. Puorger C, et al. Structure, 2008 Apr. PMID 18400183
    3. Pilus chaperones represent a new type of protein-folding catalyst. Vetsch M, et al. Nature, 2004 Sep 16. PMID 15372038
    4. Crystal structure of the ternary FimC-FimF(t)-FimD(N) complex indicates conserved pilus chaperone-subunit complex recognition by the usher FimD. Eidam O, et al. FEBS Lett, 2008 Mar 5. PMID 18242189
    5. Three fim genes required for the regulation of length and mediation of adhesion of Escherichia coli type 1 fimbriae. Klemm P, et al. Mol Gen Genet, 1987 Jul. PMID 2890081

    See all (39) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The complex between the pilus subunit FimG and the donor strand peptide of the subunit FimF shows an extrapolated dissociation half-life of 3 x 10(9) years.
      Title: Infinite kinetic stability against dissociation of supramolecular protein complexes through donor strand complementation.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell adhesion involved in single-species biofilm formation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in cell-substrate adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mechanosensory behavior IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within pilus assembly EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in pilus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in pilus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in pilus tip IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    type 1 fimbriae minor subunit FimF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4547742..4548272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418738.1 type 1 fimbriae minor subunit FimF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418738.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3HZJ3
      Conserved Domains (1) summary
      COG3539
      Location:1 → 176
      FimA; Pilin (type 1 fimbria component protein) [Cell motility]
    Nucleotide Protein
    Heading Accession and Version

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