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    ygcR putative flavoprotein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947240, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ygcR
    Official Full Name
    putative flavoprotein
    Primary source
    ECOCYC:G7436
    Locus tag
    b2770
    See related
    ASAP:ABE-0009079
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2765
    Summary
    YgcR is required for MazF-mediated cell death after DNA damage (Amitai, 2009). [More information is available at EcoGene: EG13125].
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    Genomic context

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    Sequence:
    NC_000913.3 (2895776..2896555, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative oxidoreductase with FAD/NAD(P)-binding domain Neighboring gene putative 4Fe-4S cluster-containing protein Neighboring gene putative anti-terminator regulatory protein Neighboring gene putative flavoprotein Neighboring gene putative transporter YgcS Neighboring gene putative FAD-containing dehydrogenase Neighboring gene putative deoxygluconate dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Life, death, differentiation, and the multicellularity of bacteria. Rosenberg SM. PLoS Genet, 2009 Mar. PMID 19282973, Free PMC Article
    2. Escherichia coli MazF leads to the simultaneous selective synthesis of both "death proteins" and "survival proteins". Amitai S, et al. PLoS Genet, 2009 Mar. PMID 19282968, Free PMC Article
    3. Multiple stressor-induced proteome responses of Escherichia coli BL21(DE3). Han KY, et al. J Proteome Res, 2008 May. PMID 18363324
    4. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative flavoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2895776..2896555 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417250.4 putative flavoprotein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417250.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1X3JD06, A0A979GHF6
      Conserved Domains (1) summary
      COG2086
      Location:1 → 259
      FixA; Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version

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