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    yaiW surface-exposed outer membrane lipoprotein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945038, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yaiW
    Official Full Name
    surface-exposed outer membrane lipoprotein
    Primary source
    ECOCYC:G6227
    Locus tag
    b0378
    See related
    ASAP:ABE-0001299
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0373
    Summary
    First 20 aa are predicted to be a type II signal peptide. [More information is available at EcoGene: EG13608]. The yaiW gene is a member of the E regulon . [More information is available at EcoCyc: G6227].
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    Genomic context

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    Sequence:
    NC_000913.3 (397872..398966)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene peptidoglycan DD-carboxypeptidase/peptidoglycan DD-endopeptidase Neighboring gene peptide antibiotic/peptide nucleic acid transporter Neighboring gene DUF2755 domain-containing inner membrane protein YaiY Neighboring gene DUF2754 domain-containing protein YaiZ

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Enteric YaiW is a surface-exposed outer membrane lipoprotein that affects sensitivity to an antimicrobial peptide. Arnold MF, et al. J Bacteriol, 2014 Jan. PMID 24214946, Free PMC Article
    2. New members of the Escherichia coli sigmaE regulon identified by a two-plasmid system. Rezuchova B, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900013
    3. Conserved and variable functions of the sigmaE stress response in related genomes. Rhodius VA, et al. PLoS Biol, 2006 Jan. PMID 16336047, Free PMC Article
    4. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Authors found that both YaiW and SbmA positively affect the uptake of proline-rich Bac7 peptides, suggesting a possible connection between their cellular functions.
      Title: Enteric YaiW is a surface-exposed outer membrane lipoprotein that affects sensitivity to an antimicrobial peptide.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to peptide IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in external side of cell outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    surface-exposed outer membrane lipoprotein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      397872..398966
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414912.1 surface-exposed outer membrane lipoprotein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414912.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6L7CAX0, A0A8S7EE70
      Conserved Domains (1) summary
      pfam07759
      Location:49 → 363
      DUF1615; Protein of unknown function (DUF1615)
    Nucleotide Protein
    Heading Accession and Version

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