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    ybeT Sel1 repeat-containing protein YbeT [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945243, updated on 17-Dec-2024

    Summary

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    Official Symbol
    ybeT
    Official Full Name
    Sel1 repeat-containing protein YbeT
    Primary source
    ECOCYC:G6354
    Locus tag
    b0647
    See related
    ASAP:ABE-0002213
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0640
    Summary
    Probable false positive lipoprotein prediction, Cys not conserved. [More information is available at EcoGene: EG13650].
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    Genomic context

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    Sequence:
    NC_000913.3 (678852..679406, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene Sel1 repeat-containing protein YbeQ Neighboring gene DUF1266 domain-containing protein YbeR Neighboring gene J domain-containing protein DjlB Neighboring gene DUF1266 domain-containing protein YbeU Neighboring gene co-chaperone DjlC Neighboring gene chaperone protein HscC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    2. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    Sel1 repeat-containing protein YbeT

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      678852..679406 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415180.1 Sel1 repeat-containing protein YbeT [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415180.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A793IHC3
      Conserved Domains (2) summary
      COG0790
      Location:30 → 184
      TPR; TPR repeat [Signal transduction mechanisms]
      sd00010
      Location:83 → 112
      SLR; SLR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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