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    CG6415 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34474, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG6415provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032287
    Locus tag
    Dmel_CG6415
    See related
    AllianceGenome:FB:FBgn0032287
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    151967_at; anon-32Aa; Dmel\CG6415
    Summary
    Predicted to enable aminomethyltransferase activity. Predicted to be involved in glycine decarboxylation via glycine cleavage system. Predicted to be part of glycine cleavage complex. Predicted to be active in mitochondrion. Is expressed in adult head; adult heart; embryonic/larval fat body; fat body primordium; and fat body/gonad primordium. Human ortholog(s) of this gene implicated in glycine encephalopathy. Orthologous to human AMT (aminomethyltransferase). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG6415 in Genome Data Viewer
    Location:
    32A4-32A4; 2-43 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10703621..10704930)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10703621..10704930)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR44181 Neighboring gene uncharacterized protein Neighboring gene Lipase 1 Neighboring gene Lipase 2 Neighboring gene long non-coding RNA:CR44407 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables aminomethyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables aminomethyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in glycine catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in glycine decarboxylation via glycine cleavage system ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of glycine cleavage complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of glycine cleavage complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrial matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG6415-PA
    NP_609441.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10703621..10704930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135597.3NP_609441.1  uncharacterized protein Dmel_CG6415 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609441.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5BII9, Q9VKR4
      Related
      FBpp0079697
      Conserved Domains (3) summary
      PLN02319
      Location:3403
      PLN02319; aminomethyltransferase
      pfam01571
      Location:31288
      GCV_T; Aminomethyltransferase folate-binding domain
      pfam08669
      Location:298392
      GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain